View source: R/07_Fisher_test.R
intact.fisher | R Documentation |
Performs fisher.tests on an <.intact> object column .
intact.fisher(X, Y)
X |
any column of a <Query.intact> object |
Y |
any column of a <Universe.intact> object (has to be the same column as X) |
Peforms a Fisher exact enrichment test on a column of a <Query.intact> object compared to the same column of a <Universe.intact> object.
The universe file db.intact is provided if you are lacking an universe file
This function will return a data frame with the results of the tests
Geremy Clair
intact.fisher(queryExample.intact$`Main class`, universeExample.intact$`Main class`)
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