intact.hyper: intact.hyper()

In PNNL-Comp-Mass-Spec/Rodin: Lipid Mini-on

intact.hyper()

Description

Performs hyper.tests on an <.intact> object column .

Usage

intact.hyper(X, Y)

Arguments

X	any column of a <Query.intact> object
Y	any column of a <Universe.intact> object (has to be the same column as X)

Details

Peforms a hypergeometric enrichment test on a column of a <Query.intact> object compared to the same column of a <Universe.intact> object.

The universe file db.intact is provided if you are lacking an universe file

Value

This function will return a data frame with the results of the tests

Author(s)

Geremy Clair

Examples

intact.hyper(queryExample.intact$`Main class`, universeExample.intact$`Main class`)

PNNL-Comp-Mass-Spec/Rodin documentation built on Jan. 28, 2024, 2:12 a.m.