Files in PNNL-Comp-Mass-Spec/Rodin
Lipid Mini-on

.Rbuildignore
.gitignore
DESCRIPTION
Example script/Example_of_use_ranking_mode.R Example script/Example_of_use_target_list_mode.R
LICENSE
NAMESPACE
NEWS
R/01_clean_lipid_list.R R/02_lipid_miner.R R/03_subset_lipidclass.R R/04_QueryWithinUniverse.R R/05_bionom_test.R R/06_binom_enrichment_functions.R R/07_Fisher_test.R R/08_Fisher_enrichment_functions.R R/09_EASE_test.R R/10_EASE_enrichment_functions.R R/11_hyper_test.R R/12_hyper_enrichment_functions.R R/13_KS_test.R R/14_KS_enrichment_function.R R/15_total_carbon_and_DB_by_class.R R/16_subclass_by_mainclass.R R/17_subset_allchains.R R/18_plots.R R/19_Network_maker.R R/20_dataset_documentation.R R/21_run_the_tests.R README.md
Rodin.Rproj
data/QueryExample.rda
data/RTexample.allchains.rda
data/RTexample.chain.rda
data/RTexample.intact.rda
data/RankingTableExample.rda
data/UniverseExample.rda
data/cat.colors.rda
data/cleaned.RTexample.rda
data/cleaned.queryExample.rda
data/cleaned.universeExample.rda
data/exampleEnrichmentTable.rda
data/main.colors.rda
data/queryExample.allchains.rda
data/queryExample.chain.rda
data/queryExample.intact.rda
data/sub.colors.rda
data/universeExample.allchains.rda
data/universeExample.chain.rda
data/universeExample.intact.rda
man/QueryExample.Rd man/QueryWithinUniverse.Rd man/UniverseExample.Rd man/allchains.EASE.Rd man/allchains.EASE.enrich.Rd man/allchains.barplot.Rd man/allchains.binom.Rd man/allchains.binom.enrich.Rd man/allchains.cat.Rd man/allchains.fisher.Rd man/allchains.fisher.enrich.Rd man/allchains.hyper.Rd man/allchains.hyper.enrich.Rd man/allchains.main.Rd man/allchains.sub.Rd man/cat.colors.Rd man/chain.EASE.Rd man/chain.EASE.enrich.Rd man/chain.binom.Rd man/chain.binom.enrich.Rd man/chain.fisher.Rd man/chain.fisher.enrich.Rd man/chain.hyper.Rd man/chain.hyper.enrich.Rd man/chain.length.pie.Rd man/chain.length.stack.Rd man/chain.unsat.pie.Rd man/chain.unsat.stack.Rd man/clean.lipid.list.Rd man/cleaned.db.Rd man/cleaned.queryExample.Rd man/cleaned.universeExample.Rd man/db.Rd man/db.allchains.Rd man/db.chain.Rd man/db.intact.Rd man/exampleEnrichmentTable.Rd man/intact.EASE.Rd man/intact.EASE.enrich.Rd man/intact.binom.Rd man/intact.binom.enrich.Rd man/intact.cat.pie.Rd man/intact.cat.stack.Rd man/intact.fisher.Rd man/intact.fisher.enrich.Rd man/intact.hyper.Rd man/intact.hyper.enrich.Rd man/intact.main.pie.Rd man/intact.main.stack.Rd man/intact.sub.pie.Rd man/intact.sub.stack.Rd man/lipid.miner.Rd man/lipid_edge_maker.Rd man/lipid_network_maker.Rd man/lipid_visnetwork_plot.Rd man/main.colors.Rd man/queryExample.allchains.Rd man/queryExample.chain.Rd man/queryExample.intact.Rd man/run_the_tests.Rd man/sub.colors.Rd man/subclass.mainclass.Rd man/subsetcat.Rd man/subsetmainclass.Rd man/subsetsubclass.Rd man/total.DB.cat.Rd man/total.DB.main.Rd man/total.DB.sub.Rd man/total.carbon.cat.Rd man/total.carbon.main.Rd man/total.carbon.sub.Rd man/universeExample.allchains.Rd man/universeExample.chain.Rd man/universeExample.intact.Rd
package/Rodin_0.1.0.tar.gz
package/Rodin_0.1.1.tar.gz
package/Rodin_0.1.3.tar.gz
PNNL-Comp-Mass-Spec/Rodin documentation built on May 31, 2019, 5:18 p.m.