lipid_visnetwork_plot: lipid_visnetwork_plot()

In PNNL-Comp-Mass-Spec/Rodin: Lipid Mini-on

lipid_visnetwork_plot()

Description

plots an interactive network of the lipids and enrichment terms

Usage

lipid_visnetwork_plot(X, Y, pval = 1, adjpval = 1)

Arguments

X	either a edge data.frame created with the function edge_maker() or Any lipid character object, preferably cleaned using the clean.lipid.list() function
Y	any enrichment table created with Lipid Mini-On
pval	unadjusted pvalue cutoff
adjpval	BH adjusted pvalue cutoff

Details

plots an interactive network of the lipids and enrichment terms

Value

This function will plot an interactive network

Author(s)

Geremy Clair

Examples

lipid_visnetwork_plot(cleaned.queryExample, exampleEnrichmentTable,pval=0.05)

PNNL-Comp-Mass-Spec/Rodin documentation built on Jan. 28, 2024, 2:12 a.m.