Man pages for PeteHaitch/cometh
Analyse, manage and visualise co-methylation data.
| betaCor | Compute correlations of pairs of beta-values. |
| cometh | The constructor function for CoMeth objects |
| CoMeth-class | An S4 class to store co-methylation patterns at m-tuples of... |
| fread.comethylation | A faster version of 'read.comethylation' |
| getCoverage-CoMeth-method | Get the 'coverage' from a 'CoMeth' object. |
| getPos | Extract the genomic positions from an 'MTuples' object. |
| makeMLS | Make a MethylationLociSet for a type of methylation and a... |
| MethylationLociSet | The constructor function for MethylationLociSet objects. |
| MTuples-class | An S4 class to represent m-tuples of genomic positions. |
| read.comethylation | Parse 'tsv' output files from the Python software... |
| read.mbias | Read the M-bias.txt file produced from Bismark. |
