getCoverage-CoMeth-method: Get the 'coverage' from a 'CoMeth' object.
In PeteHaitch/cometh: Analyse, manage and visualise co-methylation data.
Description
Usage
Arguments
Value
Description
The coverage of a CoMeth object is the number of reads for each m-tuple, i.e. rowSums(getCounts(CoMeth)). The current implementation is slow.
Usage
1
2
## S4 method for signature 'CoMeth'
getCoverage(x)
Arguments
x
A CoMeth object
Value
A numeric matrix. Each column of the matrix corresponds to a sample and each row to an m-tuple.
PeteHaitch/cometh documentation built on May 8, 2019, 1:32 a.m.
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Description Usage Arguments Value
Description
The coverage of a CoMeth object is the number of reads for each m-tuple, i.e. rowSums(getCounts(CoMeth)). The current implementation is slow.
Usage
1 2 | ## S4 method for signature 'CoMeth'
getCoverage(x)
|
Arguments
x |
A |
Value
A numeric matrix. Each column of the matrix corresponds to a sample and each row to an m-tuple.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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