old.tree.ex: A tree built based on a subset of alignment.ex
In PoonLab/clustuneR: Molecular clustering implementation and predictive optimization
old.tree.ex R Documentation
A tree built based on a subset of alignment.ex
Description
A maximum likelihood tree built using IQ-TREE with model selection and 1000
parametric bootstraps. The log information for this tree is stored in data/IQTREE_log_ex.txt.
A subset of six older sequences (collected before January 1st 2012) from alignment.ex
was used to construct this tree.
Usage
old.tree.ex
Format
An unrooted, phylogenetic tree with 6 tips and 4 internal nodes.
Node labels represent certainty. See ape's implementation of phylogenetic tree
objects for information about tags within this object
PoonLab/clustuneR documentation built on Jan. 29, 2024, 2:40 a.m.
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| old.tree.ex | R Documentation |
A tree built based on a subset of alignment.ex
Description
A maximum likelihood tree built using IQ-TREE with model selection and 1000 parametric bootstraps. The log information for this tree is stored in data/IQTREE_log_ex.txt. A subset of six older sequences (collected before January 1st 2012) from alignment.ex was used to construct this tree.
Usage
old.tree.ex
Format
An unrooted, phylogenetic tree with 6 tips and 4 internal nodes. Node labels represent certainty. See ape's implementation of phylogenetic tree objects for information about tags within this object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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