seq.info.ex: An example set of sequence meta.data corresponding to...
In PoonLab/clustuneR: Molecular clustering implementation and predictive optimization
seq.info.ex R Documentation
An example set of sequence meta.data corresponding to alignment.ex
Description
Built from alignment.ex, the example 10 sequence alignment using parse.headers.
The date of each sequence's collection, it's genbank unique accession ID, and
sequence subtype are referenced within the header
Usage
seq.info.ex
Format
A data.table object with 4 variables:
- ID
Accession IDs (characters) of sequences
- CollectionDate
Collection date of sequences. Full dates given as yyyy-mm-dd
- Subtype
Subtypes (factors) of sequences
- Header
The original headers from the alignement. This matches meta
data to sequences in original alignment
PoonLab/clustuneR documentation built on Jan. 29, 2024, 2:40 a.m.
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| seq.info.ex | R Documentation |
An example set of sequence meta.data corresponding to alignment.ex
Description
Built from alignment.ex, the example 10 sequence alignment using parse.headers. The date of each sequence's collection, it's genbank unique accession ID, and sequence subtype are referenced within the header
Usage
seq.info.ex
Format
A data.table object with 4 variables:
- ID
Accession IDs (characters) of sequences
- CollectionDate
Collection date of sequences. Full dates given as yyyy-mm-dd
- Subtype
Subtypes (factors) of sequences
- Header
The original headers from the alignement. This matches meta data to sequences in original alignment
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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