Files in PriceLab/FPML
Footprint Machine Learning

DESCRIPTION
NAMESPACE
R/annotateDataset.R R/buildModels.R R/constructMotifDataset.R R/mergeFootprintData.R R/plot_functions.R R/stat_functions.R README.md
inst/extdata/.Rhistory
inst/extdata/2017_08_23_Motif_TF_Map.RDS
inst/extdata/Tfmotifmap.Rdata
inst/extdata/annotateTestInput.Rdata
inst/extdata/buildTestInput.Rdata
inst/extdata/chipSeqData.Rdata
inst/extdata/fpSubTables.Rdata
inst/extdata/joinedAllStats.10M.filtered.Rdata
inst/extdata/mergeTestData.1000.Rdata
inst/extdata/motif_class_pairs.Rdata
inst/extdata/testData.Rdata
inst/extdata/testMCC.png
inst/extdata/testModels.Rdata
inst/extdata/testPrec.png
inst/extdata/testROC.png
inst/extdata/testThreshold.png
inst/extdata/testTruth.png
inst/extdata/test_truth.png
inst/extdata/test_truthplot2.png
inst/unitTests/test_annotateDataset.R inst/unitTests/test_buildModels.R inst/unitTests/test_constructMotifDataset.R inst/unitTests/test_mergeFootprintData.R man/FPML-package.Rd man/addTSSDistance.Rd man/annotateFootprintData.Rd man/buildBoostedModel.Rd man/buildLinearModels.Rd man/constructLymphoblastDataset.Rd man/createBiasOneMotif.Rd man/createMotifClassMap.Rd man/createTfDf.Rd man/createThresholdPlot.Rd man/createTruthPlot.Rd man/extractMaxMCC.Rd man/getGCContent.Rd man/joinModelData.Rd man/make.pred.df.from.glm.Rd man/make.pred.df.from.model.Rd man/make.stats.df.from.preds.Rd man/mapTFsToMotifs.Rd man/mattcc.Rd man/mattcc.curve.Rd man/mergeFootprintsOneChrom.Rd man/mergeLymphoblastFootprints.Rd man/plot.all.curve.Rd man/plot.mattcc.curve.Rd man/plot.precrecall.curve.Rd man/plot.roc.curve.Rd man/plotImportanceMatrix.Rd man/plotStatCurves.Rd man/prepModelData.Rd man/sampleTfDataset.Rd vignettes/Intro_to_FPML.Rmd
PriceLab/FPML documentation built on Dec. 23, 2017, 3:33 p.m.