Description Usage Arguments Value
Create a "threshold" plot, which plots the 3 relevant prediction metrics against threshold to enable identification of the ideal "threshold" for ChIPseq hit probability.
1 | createThresholdPlot(stats.df, modelName, plotFile)
|
stats.df |
A dataframe of statistics generated by one of the model runs |
modelName |
A string containing a model name from the stats data frame. To see the options available, use unique(stats.df$Model.Name) |
plotFile |
A path to a file for saving the generated plot as a .png file |
A .png file containing a plot of 3 metrics (sensitivity, specificity, ppv) as a function of threshold
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