MONSTER-package: Modeling Network State Transitions from Expression and...
In QuackenbushLab/MONSTER: Modeling Network State Transitions from Expression and Regulatory data (MONSTER)
Description
Details
Author(s)
See Also
Description
MONSTER indentifies transcription factor drivers of state change from expression data.
Details
The DESCRIPTION file:
This package was not yet installed at build time.
Index: This package was not yet installed at build time.
MONSTER takes in sequence motif data linking transcription factors (TFs) to genes and gene expression from two conditions. The goal is generate bipartite networks from the gene expression data which quantify evidence of the regulatory roles of each of the TFs to each of the genes. Next, critical TFs are identified by computing a transition matrix, which maps the gene regulatory network in the first state to the gene regulatory network in the second state.
Author(s)
"Dan Schlauch <dschlauch@fas.harvard.edu>"
Maintainer: Dan Schlauch <dschlauch@fas.harvard.edu>
See Also
QuackenbushLab/MONSTER documentation built on Oct. 22, 2020, 8:07 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Details Author(s) See Also
Description
MONSTER indentifies transcription factor drivers of state change from expression data.
Details
The DESCRIPTION file:
This package was not yet installed at build time.
Index: This package was not yet installed at build time.
MONSTER takes in sequence motif data linking transcription factors (TFs) to genes and gene expression from two conditions. The goal is generate bipartite networks from the gene expression data which quantify evidence of the regulatory roles of each of the TFs to each of the genes. Next, critical TFs are identified by computing a transition matrix, which maps the gene regulatory network in the first state to the gene regulatory network in the second state.
Author(s)
"Dan Schlauch <dschlauch@fas.harvard.edu>"
Maintainer: Dan Schlauch <dschlauch@fas.harvard.edu>
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.