Man pages for QuackenbushLab/pandaR
PANDA Algorithm

calcDegreeCalculate regulatory network degree
calcDegreeDifferenceCalculate difference in degrees
exportNetworkNetwork exporter
importPandaMatlabPanda Matlab importer
lionessCompute LIONESS (Linear Interpolation to Obtain Network...
multiplotMultiple plots
pandaPassing Messages between Biological Networks to Refine...
pandaRpandaR: Passing Messages between Biological Networks to...
pandaResultAnalysis result from PANDA algorithm on toy data
pandaResultPairsAnalysis result from PANDA algorithm on toy data converted...
pandaToyDataToy gene expression, motif, and ppi data
plotCommunityDetectionCommunity detection plot
plotGraphPlot graph
plot.pandaPlot.panda
plotZComparison of Z scores between two PANDA runs
plotZbyTFPlot Z by TF out-degree quantiles
print.pandaprint.panda
subnetworkSubnetwork
summary.pandaSummary.panda
targetedGenestargetedGenes
testMotifCheck motif
topedgesTop edges
validateNetworkCompare a panda network with a gold standard
QuackenbushLab/pandaR documentation built on May 9, 2017, 8:42 p.m.