exportNetwork: Network exporter
In QuackenbushLab/pandaR: PANDA Algorithm
Description
Usage
Arguments
Examples
Description
exportNetwork writes the panda network (RegNet) to foreign file formats.
Usage
1
exportNetwork(x, file, format = "ncol")
Arguments
x
An object of class "panda" or an incidence network matrix.
file
A connection or a string giving the file name to output the network.
format
Character string giving the file format supported by igraph.
Examples
1
2
3
4
data(pandaToyData)
pandaRes <- panda(pandaToyData$motif, pandaToyData$expression, pandaToyData$ppi)
topPandaRes <- topedges(pandaRes, 1000)
exportNetwork(topPandaRes, 'topPandaRes.txt')
QuackenbushLab/pandaR documentation built on May 8, 2019, 3:49 a.m.
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Description Usage Arguments Examples
Description
exportNetwork writes the panda network (RegNet) to foreign file formats.
Usage
1 | exportNetwork(x, file, format = "ncol")
|
Arguments
x |
An object of class "panda" or an incidence network matrix. |
file |
A connection or a string giving the file name to output the network. |
format |
Character string giving the file format supported by igraph. |
Examples
1 2 3 4 | data(pandaToyData)
pandaRes <- panda(pandaToyData$motif, pandaToyData$expression, pandaToyData$ppi)
topPandaRes <- topedges(pandaRes, 1000)
exportNetwork(topPandaRes, 'topPandaRes.txt')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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