Files in RGLab/CytoML
A GatingML Interface for Cross Platform Cytometry Data Sharing

.Rbuildignore
CONDUCT.md
DESCRIPTION
NAMESPACE
R/AllClasses.R R/GatingSet2cytobank.R R/GatingSet2flowJo.R R/RcppExports.R R/compensation.R R/cytobank2GatingSet.R R/cytobankExperiment.R R/diva2GatingSet.R R/flowJoWorkspace_Methods.R R/flowUtils_functions.R R/gate-methods.R R/gatingML.R R/graphGML_methods.R R/helperFunctions.R R/parameter-methods.R R/parseDivaWorkspace_old.R R/read.gatingML.cytobank.R R/transforms.R R/utils.R R/writeGatingML.R R/zzz.R README.Rmd README.md
README_files/figure-gfm/unnamed-chunk-3-1.png
README_files/figure-gfm/unnamed-chunk-3-2.png
README_files/figure-gfm/unnamed-chunk-4-1.png
README_files/figure-gfm/unnamed-chunk-6-1.png
README_files/figure-gfm/unnamed-chunk-7-1.png
configure
configure.ac
inst/NEWS
inst/cppTest/unitTest/computeCalibrationTable.cpp
inst/cppTest/unitTest/cpConstructorTest.cpp
inst/cppTest/unitTest/gatingSet_test.cpp
inst/cppTest/unitTest/ncdfFlow.cpp
inst/cppTest/unitTest/ncdfFlow.hpp
inst/cppTest/unitTest/ncdf_test.cpp
inst/cppTest/unitTest/spline_test.cpp
inst/cppTest/unitTest/src.cpp
inst/cppTest/unitTest/testSuite.cpp
inst/cppTest/unitTest/test_header.hpp
inst/defaults.xml
inst/extdata/cytobank_experiment.acs
inst/extdata/cytotrol_tcell_cytobank_logt_counts.csv
inst/extdata/logtGml.xml
inst/extdata/winlist.wlx
inst/include/CytoML.h
inst/include/flowWorkspace/flowJoWorkspace.hpp
inst/include/flowWorkspace/macFlowJoWorkspace.hpp
inst/include/flowWorkspace/openWorkspace.hpp
inst/include/flowWorkspace/winFlowJoWorkspace.hpp
inst/include/flowWorkspace/workspace.hpp
inst/include/flowWorkspace/wsNode.hpp
inst/schema/CytoML.v1.0.xsd
man/CytoML.par.get.Rd man/CytoML.par.init.Rd man/GatingSet-methods.Rd man/addCustomInfo.Rd man/compensate-GatingSet-graphGML-method.Rd man/constructTree.Rd man/cytobank_to_gatingset.Rd man/diva_workspace-class.Rd man/extend.Rd man/fj_ws_get_keywords.Rd man/fj_ws_get_sample_groups.Rd man/flowjo_to_gatingset.Rd man/flowjo_workspace-class.Rd man/gating-methods.Rd man/gatingset_to_cytobank.Rd man/gatingset_to_flowjo.Rd man/getChildren-graphGML-character-method.Rd man/getCompensationMatrices.graphGML.Rd man/getFJWSubsetIndices.Rd man/getGate-graphGML-character-method.Rd man/getNodes-graphGML-method.Rd man/getParent-graphGML-character-method.Rd man/getSamples.Rd man/getTransformations.graphGML.Rd man/graphGML-class.Rd man/gs_compare_cytobank_counts.Rd man/matchPath.Rd man/open_cytobank_experiment.Rd man/open_diva_xml.Rd man/open_flowjo_xml.Rd man/parse.gateInfo.Rd man/plot-graphGML-missing-method.Rd man/range.GatingHierarchy.Rd man/read.gatingML.cytobank.Rd man/show-graphGML-method.Rd
src/Makevars.in
src/Makevars.win
src/RcppExports.cpp
src/parseFlowJoWorkspace.cpp
tests/testthat.R tests/testthat/Cytobank2GatingSet-InternalTestSuite.R tests/testthat/GatingSet2flowJo-InternalTestSuite.R tests/testthat/diva2gs-InternalTestSuite.R
tests/testthat/expect_result/flowJoWorkspace_expect.rds
tests/testthat/flowJoWorkspace-testSuite.R tests/testthat/flowjo2gs_internalTestSuite.R tests/testthat/helper-lib.R tests/testthat/test-GatingSet2flowJo.R tests/testthat/test-cytobank.R tests/testthat/test-diva2gs.R tests/testthat/test-extend.R tests/testthat/test-flowjo2gs.R tests/testthat/test-internal-suite.R vignettes/HowToExportGatingSet.Rmd
vignettes/HowToParseGatingML.html
vignettes/cytobank.png
vignettes/cytobank2GatingSet.Rmd
vignettes/flowJo.png
RGLab/CytoML documentation built on Nov. 6, 2019, 4:59 p.m.