parse.gateInfo: Parse the cytobank custom_info for each gate
In RGLab/CytoML: A GatingML Interface for Cross Platform Cytometry Data Sharing
View source: R/read.gatingML.cytobank.R
parse.gateInfo R Documentation
Parse the cytobank custom_info for each gate
Description
Fcs filename and gate name stored in 'custom_info' element are beyong the scope of
the gatingML standard and thus not covered by the default 'read.gatingML'.
Usage
parse.gateInfo(file, ...)
Arguments
file
xml file path
...
additional arguments passed to the handlers of 'xmlTreeParse'
Value
a data.frame that contains three columns: id (gateId), name (gate name), fcs (fcs_file_filename).
RGLab/CytoML documentation built on Feb. 1, 2024, 12:34 a.m.
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View source: R/read.gatingML.cytobank.R
| parse.gateInfo | R Documentation |
Parse the cytobank custom_info for each gate
Description
Fcs filename and gate name stored in 'custom_info' element are beyong the scope of the gatingML standard and thus not covered by the default 'read.gatingML'.
Usage
parse.gateInfo(file, ...)
Arguments
file |
xml file path |
... |
additional arguments passed to the handlers of 'xmlTreeParse' |
Value
a data.frame that contains three columns: id (gateId), name (gate name), fcs (fcs_file_filename).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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