hgnc_to_ensembl: Convert HGNC gene symbols to ENSEMBL IDs

In RajLabMSSM/catalogueR: QTL data extraction and colocalization

Convert HGNC gene symbols to ENSEMBL IDs

Description

Convert HGNC gene symbols to ENSEMBL IDs using the EnsDb.Hsapiens.v75 Bioconductor package.

Usage

hgnc_to_ensembl(gene_symbols, unique_only = TRUE, verbose = TRUE)

Arguments

gene_symbols	Character vector of HGNC gene IDs.
unique_only	Only query unique entries gene_symbols.
verbose	Print messages.

See Also

Other utils: ensembl_to_hgnc(), merge_files()

Examples

gene_symbols <- c("BDNF", "FOXP2", "BST1")
ensembl_ids <- catalogueR::hgnc_to_ensembl(gene_symbols)

RajLabMSSM/catalogueR documentation built on Jan. 1, 2023, 10:45 a.m.