API for RamsinghLab/ATACseeker
Utilities for ATACseq QC, differential accessibility, and integration
| Global functions | |
|---|---|
| ATACseeker | Man page |
| ATACseeker-package | Man page |
| addMtGeneLabel | Man page |
| atacPairedEnd | Man page |
| callMT | Man page |
| collectStats | Man page |
| fragPlot | Man page |
| fragmentLengths | Man page |
| get5primeCuts | Man page |
| getComplexity | Man page |
| getEnds | Man page |
| getEsts | Man page |
| getFeatureCounts | Man page |
| getMT | Man page |
| getQC | Man page |
| plotComplexity | Man page |
| plotCoverage | Man page |
| plotMT | Man page |
| plotStranded | Man page |
| processUcscCytoband | Man page |
| shrinkPairs | Man page |
| tssQcPlot | Man page |
