collectStats: collect various cross-correlation and window size stats for...
In RamsinghLab/ATACseeker: Utilities for ATACseq QC, differential accessibility, and integration
Description
Usage
Arguments
Value
Description
collect various cross-correlation and window size stats for QC
Usage
1
collectStats(curbam, pe.param)
Arguments
curbam
the name of the BAM file to do this for
pe.param
paired end parameters, derived elsewhere
Value
the output of csaw::profileSites after massaging inputs
RamsinghLab/ATACseeker documentation built on May 8, 2019, 8:05 a.m.
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Description Usage Arguments Value
Description
collect various cross-correlation and window size stats for QC
Usage
1 | collectStats(curbam, pe.param)
|
Arguments
curbam |
the name of the BAM file to do this for |
pe.param |
paired end parameters, derived elsewhere |
Value
the output of csaw::profileSites after massaging inputs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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