Description Usage Arguments Value Author(s)
This function can be used to extract OSW data for several runs from an OSW file, and concatenate them into one table with a run id
1 2 3 4 5 6 7 8 9 | catOSWruns_(
sqMass_files,
in_osw,
which_m_score = "m_score",
m_score_filter = 0.05,
report_top_single_result = T,
run_sub_expression = NULL,
...
)
|
sqMass_files |
An array of character paths to the chromatograms that have corresponding names in the OSW file. |
in_osw |
A character vector of the absolute path and filename of the osw file. (Must be .osw format) |
which_m_score |
A character vector indicating which m_score to use. (Options: m_score or ms2-m_score. Default: 'm_score') |
m_score_filter |
A numeric vector indicating the threshold m_score cut-off value for filtering. (Defualt: 0.05) |
report_top_single_result |
A logical value indificating to keep only the results with the lowest m_score. (Default: TRUE) |
A data.table containing Run ID information
Justin Sing https://github.com/singjc
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