filterPQPdb: Filter and PQP db file
In Roestlab/mstools: OpenSWATH Mass Spectrometry Data Exploration
Description
Usage
Arguments
Value
Author(s)
Description
This function can be used to filter an PQP db file given a list of unmodified sequences
Usage
1
filterPQPdb(pqp_file, unmodified_sequence_filter)
Arguments
pqp_file
A character vector of the absolute path and filename of the sqMass file. (Must be .osw format)
unmodified_sequence_filter
A character vector for extraction of specific peptide(s). I.e. c('ANSSPTTNIDHLK', 'ESTAEPDSLSR', 'NLSPTKQNGKATHPR', 'KDSNTNIVLLK', 'NKESPTKAIVR')
Value
A data.table containing spectral library information
Author(s)
Justin Sing https://github.com/singjc
Roestlab/mstools documentation built on Feb. 7, 2020, 3:57 p.m.
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Description Usage Arguments Value Author(s)
Description
This function can be used to filter an PQP db file given a list of unmodified sequences
Usage
1 | filterPQPdb(pqp_file, unmodified_sequence_filter)
|
Arguments
pqp_file |
A character vector of the absolute path and filename of the sqMass file. (Must be .osw format) |
unmodified_sequence_filter |
A character vector for extraction of specific peptide(s). I.e. c('ANSSPTTNIDHLK', 'ESTAEPDSLSR', 'NLSPTKQNGKATHPR', 'KDSNTNIVLLK', 'NKESPTKAIVR') |
Value
A data.table containing spectral library information
Author(s)
Justin Sing https://github.com/singjc
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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