ORFik.template.experiment: An ORFik experiment to see how it looks

In Roleren/ORFik: Open Reading Frames in Genomics

An ORFik experiment to see how it looks

Description

Toy-data created to resemble human genes:
Number of genes: 6
Genome size: 1161nt x 6 chromosomes = 6966 nt
Experimental design (2 replicates, Wild type vs Mutant)
CAGE: 4 libraries
PAS (poly-A): 4 libraries
Ribo-seq: 4 libraries
RNA-seq: 4 libraries

Usage

ORFik.template.experiment(as.temp = FALSE)

Arguments

as.temp

logical, default FALSE, load as ORFik experiment. If TRUE, loads as data.frame template of the experiment.

Value

an ORFik experiment

See Also

Other ORFik_experiment: ORFik.template.experiment.zf(), bamVarName(), create.experiment(), experiment-class, filepath(), libraryTypes(), organism,experiment-method, outputLibs(), read.experiment(), save.experiment(), validateExperiments()

Examples

ORFik.template.experiment()

Roleren/ORFik documentation built on Dec. 18, 2024, 11:39 p.m.