fix_malformed_gff: Fix a malformed gff file
In Roleren/ORFik: Open Reading Frames in Genomics
View source: R/genome_download_helper.R
fix_malformed_gff R Documentation
Fix a malformed gff file
Description
Basically removes all info lines with character length > 32768 and
save that new file.
Usage
fix_malformed_gff(gff)
Arguments
gff
character, path to gtf, can not be gzipped!
Value
path of fixed gtf
Examples
# fix_malformed_gff("my_bad_gff.gff")
Roleren/ORFik documentation built on Nov. 13, 2024, 10 p.m.
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View source: R/genome_download_helper.R
| fix_malformed_gff | R Documentation |
Fix a malformed gff file
Description
Basically removes all info lines with character length > 32768 and save that new file.
Usage
fix_malformed_gff(gff)
Arguments
gff |
character, path to gtf, can not be gzipped! |
Value
path of fixed gtf
Examples
# fix_malformed_gff("my_bad_gff.gff")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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