removeORFsWithSameStartAsCDS: Remove ORFs that have same start site as the CDS
In Roleren/ORFik: Open Reading Frames in Genomics
removeORFsWithSameStartAsCDS R Documentation
Remove ORFs that have same start site as the CDS
Description
Remove ORFs that have same start site as the CDS
Usage
removeORFsWithSameStartAsCDS(grl, cds)
Arguments
grl
(GRangesList), the ORFs to filter
cds
(GRangesList), the coding sequences (main ORFs on transcripts),
to filter against.
Value
(GRangesList) of filtered uORFs
See Also
Other uorfs:
addCdsOnLeaderEnds(),
filterUORFs(),
removeORFsWithSameStopAsCDS(),
removeORFsWithStartInsideCDS(),
removeORFsWithinCDS(),
uORFSearchSpace()
Roleren/ORFik documentation built on April 25, 2024, 8:41 p.m.
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| removeORFsWithSameStartAsCDS | R Documentation |
Remove ORFs that have same start site as the CDS
Description
Remove ORFs that have same start site as the CDS
Usage
removeORFsWithSameStartAsCDS(grl, cds)
Arguments
grl |
(GRangesList), the ORFs to filter |
cds |
(GRangesList), the coding sequences (main ORFs on transcripts), to filter against. |
Value
(GRangesList) of filtered uORFs
See Also
Other uorfs:
addCdsOnLeaderEnds(),
filterUORFs(),
removeORFsWithSameStopAsCDS(),
removeORFsWithStartInsideCDS(),
removeORFsWithinCDS(),
uORFSearchSpace()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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