mean_rel_abundances: Get mean relative abundances of taxa in general or per...
In SWittouck/tidyamplicons: Functions to Manipulate and Visualize Amplicon Abundance Data
mean_rel_abundances R Documentation
Get mean relative abundances of taxa in general or per condition
Description
Returns tidy table with average relatively abundances of taxa, overall or per
condition.
Usage
mean_rel_abundances(ta, condition = NULL)
Arguments
ta
a tidyamplicons object
condition
a string representing a categorical variable to compute the relative abundances in every option of the variable
Details
Condition should be a categorical variable present in the samples table.
Supply condition as a string.
SWittouck/tidyamplicons documentation built on Aug. 15, 2023, 3:14 a.m.
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| mean_rel_abundances | R Documentation |
Get mean relative abundances of taxa in general or per condition
Description
Returns tidy table with average relatively abundances of taxa, overall or per condition.
Usage
mean_rel_abundances(ta, condition = NULL)
Arguments
ta |
a tidyamplicons object |
condition |
a string representing a categorical variable to compute the relative abundances in every option of the variable |
Details
Condition should be a categorical variable present in the samples table. Supply condition as a string.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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