add_phylogroup_color: Add color variable for phylogroups
In SWittouck/tidyorthogroups: A Grammar of Genome Data Manipulation
add_phylogroup_color R Documentation
Add color variable for phylogroups
Description
This function adds a variable phylogroup_color to the phylogroup table that
can be used to plot phylogroup colors in cases where there are too many
phylogroups for the color scale you want to use.
Usage
add_phylogroup_color(tg, n = 12)
Arguments
tg
A tidygenomes object
n
The number of colors
Details
The variable phylogroup_color assigns a number to each phylogroup, in order
of the ladderized tree. If there are more phylogroups than numbers, the
numbers will be recycled. The goal is that two phylogroups that are directly
next to each other in the tree labels will never have the same color.
Value
A tidygenomes object
SWittouck/tidyorthogroups documentation built on Feb. 2, 2023, 12:45 a.m.
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| add_phylogroup_color | R Documentation |
Add color variable for phylogroups
Description
This function adds a variable phylogroup_color to the phylogroup table that can be used to plot phylogroup colors in cases where there are too many phylogroups for the color scale you want to use.
Usage
add_phylogroup_color(tg, n = 12)
Arguments
tg |
A tidygenomes object |
n |
The number of colors |
Details
The variable phylogroup_color assigns a number to each phylogroup, in order of the ladderized tree. If there are more phylogroups than numbers, the numbers will be recycled. The goal is that two phylogroups that are directly next to each other in the tree labels will never have the same color.
Value
A tidygenomes object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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