save_allele_seqs: Save identified alleles to FASTA files
In ShawHahnLab/chiimp: Computational, High-throughput Individual Identification through Microsatellite Profiling
save_allele_seqs R Documentation
Save identified alleles to FASTA files
Description
Take the alleles identified by analyze_dataset in the summary data frame
and save each entry to a separate FASTA file. Samples identified as
homozygous will have one sequence written rather than two. Entries with no
identified alleles will be skipped.
Usage
save_allele_seqs(results_summary, dp)
Arguments
results_summary
summary data frame as produced by analyze_dataset.
dp
output directory path to use for all files.
ShawHahnLab/chiimp documentation built on Aug. 20, 2023, 1:41 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| save_allele_seqs | R Documentation |
Save identified alleles to FASTA files
Description
Take the alleles identified by analyze_dataset in the summary data frame and save each entry to a separate FASTA file. Samples identified as homozygous will have one sequence written rather than two. Entries with no identified alleles will be skipped.
Usage
save_allele_seqs(results_summary, dp)
Arguments
results_summary |
summary data frame as produced by analyze_dataset. |
dp |
output directory path to use for all files. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.