save_seqfile_data: Save per-file processed data to text files

View source: R/io.R

save_seqfile_dataR Documentation

Save per-file processed data to text files

Description

Save each per-file data frame produced by analyze_dataset (via analyze_seqs) to a separate file in the specified directory path, in CSV format. The directory structure will start at the first shared directory of the input file paths. For example, if the inputs were ⁠/data/run1/file.fastq⁠ and ⁠/data/run2/file.fastq⁠ there will be run1 and run2 directories inside the given dp directory.

Usage

save_seqfile_data(results_file_data, dp)

Arguments

results_file_data

list of per-file data frames as produced by analyze_dataset.

dp

output directory path to use for all files.


ShawHahnLab/chiimp documentation built on Aug. 20, 2023, 1:41 a.m.