seekCreateGeneSet: Create a gene set

In Solatar/seeqR:

Description

Create a gene set

Usage

seekCreateGeneSet(
  name,
  IDs,
  species,
  translate = NA,
  pmids = "",
  desc1 = "",
  desc2 = "",
  contributor = ""
)

Arguments

name	string, give the gene a short descriptive name
IDs	vector of identifiers (strings or integers)
species	string, either "Homo sapiens" or "Mus musculus"
translate	string, translate IDs to entrezids. Must be "SYMBOL", "ENSEMBL" or other valid types
pmids	string, Pubmed ID
desc1	string, short description
desc2	string, long description
contributor	string

Value

Vector of human Entrez IDs (or, if matrix=T, a matrix of mouse and human Entrez IDs)

Solatar/seeqR documentation built on Feb. 19, 2021, 8:07 p.m.