seekmagecksummary: plot MAGeCK count summary
In Solatar/seeqR:
Description
Usage
Arguments
Details
Value
Examples
Description
Imports:
reshape2,
ggpubr,
ggplot2
Usage
1
seekmagecksummary(filepath, color1 = "gray30", color2 = "blue")
Arguments
filepath
character, path to file "...countsummary.txt"
Details
takes in the mageck count side-output "...countsummary.txt" to create plots for mapping and gini index
Value
list with a ggparrange, a ggplot object, and dataframes used to produce the plots
Examples
1
summ <- seekmagecksummary("myexperiment.countsummary.txt")
Solatar/seeqR documentation built on Feb. 19, 2021, 8:07 p.m.
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Description Usage Arguments Details Value Examples
Description
Imports: reshape2, ggpubr, ggplot2
Usage
1 | seekmagecksummary(filepath, color1 = "gray30", color2 = "blue")
|
Arguments
filepath |
character, path to file "...countsummary.txt" |
Details
takes in the mageck count side-output "...countsummary.txt" to create plots for mapping and gini index
Value
list with a ggparrange, a ggplot object, and dataframes used to produce the plots
Examples
1 | summ <- seekmagecksummary("myexperiment.countsummary.txt")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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