Files in StoXProject/RstoxBase

Base StoX Functions

NEWS.md R/Abundance.R R/Acoustic.R R/Data.R R/Define.R R/Definitions.R R/Density.R R/ImputeSuperIndividuals_StoX3.R R/LengthDistribution.R R/Plot.R R/Report.R R/RstoxBase-package.R R/Spatial.R R/SpeciesCategoryCatch.R R/Utilities.R R/backwardCompatibility.R R/stoxFunctionAttributes.R README.md inst/tinytest/test-DefineStratumPolygon.R inst/tinytest/testSpeciesCategoryCatch.R inst/tinytest/testUnits.R man/AcousticDensity.Rd man/AcousticLayer.Rd man/AcousticPSU.Rd man/AcousticTargetStrength.Rd man/AddHaulDensityToSuperIndividuals.Rd man/AppendNASC.Rd man/AssignmentLengthDistribution.Rd man/AssignmentLengthDistributionData.Rd man/BioticAssignment.Rd man/BioticAssignmentWeighting.Rd man/BioticLayer.Rd man/BioticPSU.Rd man/Channel.Rd man/DataTypes.Rd man/DefineAcousticLayer.Rd man/DefineAcousticPSU.Rd man/DefineAcousticTargetStrength.Rd man/DefineBioticAssignment.Rd man/DefineBioticLayer.Rd man/DefineBioticPSU.Rd man/DefineLayer.Rd man/DefineModel.Rd man/DefinePSU.Rd man/DefineRegression.Rd man/DefineStratumPolygon.Rd man/DefineSurvey.Rd man/DensityData.Rd man/EDSU.Rd man/EstimateBioticRegression.Rd man/GearDependentCatchCompensation.Rd man/GearDependentLengthDistributionCompensation.Rd man/GearDependentSpeciesCategoryCatchCompensation.Rd man/Haul.Rd man/ImputeSuperIndividuals.Rd man/ImputeSuperIndividuals_StoX3.Rd man/Individuals.Rd man/IndividualsData.Rd man/Layer.Rd man/LengthDependentLengthDistributionCompensation.Rd man/LengthDistribution.Rd man/LengthDistributionData.Rd man/MeanDensity.Rd man/MeanDensityData.Rd man/MeanLengthDistribution.Rd man/MeanLengthDistributionData.Rd man/MeanNASC.Rd man/MeanNASCData.Rd man/MeanSpeciesCategoryCatch.Rd man/MeanSpeciesCategoryCatchData.Rd man/ModelData.Rd man/NASC.Rd man/NASCData.Rd man/NASCToStoxAcoustic.Rd man/PSU.Rd man/PlotAcousticTrawlSurvey.Rd man/PlotAcousticTrawlSurveyData.Rd man/ProcessData.Rd man/Quantity.Rd man/QuantityData.Rd man/Regression.Rd man/RegroupLengthDistribution.Rd man/RelativeLengthDistribution.Rd man/ReportDensity.Rd man/ReportDensityData.Rd man/ReportFunctions.Rd man/ReportQuantity.Rd man/ReportQuantityData.Rd man/ReportSpeciesCategoryCatch.Rd man/ReportSpeciesCategoryCatchData.Rd man/ReportSuperIndividuals.Rd man/ReportSuperIndividualsData.Rd man/Resolution.Rd man/RstoxBase.Rd man/SpeciesCategoryCatch.Rd man/SpeciesCategoryCatchData.Rd man/SplitMeanNASC.Rd man/SplitNASC.Rd man/Station.Rd man/StoX_multipolygon_WKT.Rd man/StoxDataStartMiddleStopDateTime.Rd man/Stratum.Rd man/StratumArea.Rd man/StratumAreaData.Rd man/StratumPolygon.Rd man/SumLengthDistribution.Rd man/SumLengthDistributionData.Rd man/SumNASC.Rd man/SumNASCData.Rd man/SumSpeciesCategoryCatch.Rd man/SumSpeciesCategoryCatchData.Rd man/SuperIndividuals.Rd man/SuperIndividualsData.Rd man/Survey.Rd man/SweptAreaDensity.Rd man/WriteStratumPolygon.Rd man/WriteStratumPolygonData.Rd man/aggregateBaselineDataOneTable.Rd man/aggregateBaselineDataOneTableSingleFunction.Rd man/allEqual.Rd man/allargs.Rd man/backwardCompatibility_RstoxBase.Rd man/combined.color.Rd man/cv.Rd man/factorNAfirst.Rd man/filterTable.Rd man/formatOutput.Rd man/formatProcessData.Rd man/fractionOfOccurrence.Rd man/fractionOfSum.Rd man/general_arguments.Rd man/general_arguments2.7.Rd man/general_map_plot_arguments.Rd man/general_plot_arguments.Rd man/general_report_arguments.Rd man/getBaseUnit.Rd man/getCommonIntervals.Rd man/getDataTypeDefinition.Rd man/getFunctionArgumentHierarchyForSpcificationParameters.Rd man/getProjectXMLFilePath.Rd man/getReportFunctionVariableName.Rd man/getReportFunctions.Rd man/getRstoxBaseDefinitions.Rd man/getSeedVector.Rd man/getStratumNames.Rd man/hasBaseUnit.Rd man/modifyParameter_ProjectXMLList.Rd man/modifyProj4String.Rd man/number.Rd man/processPropertyFormats.Rd man/readAcousticPSUFrom2.7.Rd man/readBioticAssignmentFrom2.7.Rd man/readBioticPSUFrom2.7.Rd man/readProjectXMLToList.Rd man/readStratumPolygonFrom2.7.Rd man/renameSSULabelInPSUProcessData.Rd man/replaceNAByReference.Rd man/sampleSorted.Rd man/setBaseUnit.Rd man/setDefaultsInStoxFunction.Rd man/setPlotAttributes.Rd man/setUnitRstoxBase.Rd man/stoxFunctionAttributes.Rd man/summaryStox.Rd man/toJSON_Rstox.Rd man/writeProjectXMLToList.Rd tests/tinytest.R