DSAVEAlignDataset: DSAVEAlignDataset
In SysBioChalmers/DSAVE-R: DSAVE: Tools to Investigate Variation and Purity of Subpopulations in Single-Cell RNA-Seq Data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
View source: R/DSAVEAlignDataset.R
Description
Align a cell population to a template
Usage
1
DSAVEAlignDataset(data, templInfo)
Arguments
data
matrix or sparse matrix, the type is preserved in the output
templInfo
list with one element called UMIDistr containing template information
Details
Aligns the cell population to the template, by removing genes, removing cells and down-sampling the
data to match the template as good as possible.
All cell populations successfully aligned to the same template will have almost
identical sampling noise.
Value
a matrix
Author(s)
Juan Inda, <inda@chalmers.se>
Examples
1
## Not run: dsAligned = DSAVEAlignDataset(data, templInfo)
SysBioChalmers/DSAVE-R documentation built on Oct. 19, 2021, 11:37 p.m.
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Description Usage Arguments Details Value Author(s) Examples
View source: R/DSAVEAlignDataset.R
Description
Align a cell population to a template
Usage
1 | DSAVEAlignDataset(data, templInfo)
|
Arguments
data |
matrix or sparse matrix, the type is preserved in the output |
templInfo |
list with one element called UMIDistr containing template information |
Details
Aligns the cell population to the template, by removing genes, removing cells and down-sampling the data to match the template as good as possible. All cell populations successfully aligned to the same template will have almost identical sampling noise.
Value
a matrix
Author(s)
Juan Inda, <inda@chalmers.se>
Examples
1 | ## Not run: dsAligned = DSAVEAlignDataset(data, templInfo)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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