DSAVEPlotDivergence: DSAVEPlotDivergence
In SysBioChalmers/DSAVE-R: DSAVE: Tools to Investigate Variation and Purity of Subpopulations in Single-Cell RNA-Seq Data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
View source: R/DSAVEPlotDivergence.R
Description
Creates an interactive plotly plot showing cell divergence and gene divergence per cell
Usage
1
DSAVEPlotDivergence(data, divData)
Arguments
data
The UMI count data
divData
The output from the function DSAVEGetSingleCellDivergence
Details
Calculates the average pairwise total variation between two pools of cells with specific size,
with a TPM filtration on the genes.
Value
nothing
Author(s)
Johan Gustafsson, <gustajo@chalmers.se>
Examples
1
## Not run: DSAVEPlotDivergence(data, divData)
SysBioChalmers/DSAVE-R documentation built on Oct. 19, 2021, 11:37 p.m.
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Description Usage Arguments Details Value Author(s) Examples
View source: R/DSAVEPlotDivergence.R
Description
Creates an interactive plotly plot showing cell divergence and gene divergence per cell
Usage
1 | DSAVEPlotDivergence(data, divData)
|
Arguments
data |
The UMI count data |
divData |
The output from the function DSAVEGetSingleCellDivergence |
Details
Calculates the average pairwise total variation between two pools of cells with specific size, with a TPM filtration on the genes.
Value
nothing
Author(s)
Johan Gustafsson, <gustajo@chalmers.se>
Examples
1 | ## Not run: DSAVEPlotDivergence(data, divData)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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