getGeneCVs: getGeneCVs
In SysBioChalmers/DSAVE-R: DSAVE: Tools to Investigate Variation and Purity of Subpopulations in Single-Cell RNA-Seq Data
Description
Usage
Arguments
Value
Author(s)
Description
Help function for DSAVECalcBTMScore. Calculates coefficient of variation (CV).
Usage
1
getGeneCVs(ds, logTPMAddon, toLog = FALSE)
Arguments
ds
numeric matrix
logTPMAddon
default 1, when using log transformed data, this number is added to the data before transforming to avoid log(0)
toLog
default FALSE, if TRUE calculation will be done on log transformed data
Value
a vector
Author(s)
Juan Inda, <inda@chalmers.se>
SysBioChalmers/DSAVE-R documentation built on Oct. 19, 2021, 11:37 p.m.
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Description Usage Arguments Value Author(s)
Description
Help function for DSAVECalcBTMScore. Calculates coefficient of variation (CV).
Usage
1 | getGeneCVs(ds, logTPMAddon, toLog = FALSE)
|
Arguments
ds |
numeric matrix |
logTPMAddon |
default 1, when using log transformed data, this number is added to the data before transforming to avoid log(0) |
toLog |
default FALSE, if TRUE calculation will be done on log transformed data |
Value
a vector
Author(s)
Juan Inda, <inda@chalmers.se>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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