DSAVEPlotTotalVariation: DSAVEPlotTotalVariation

In SysBioChalmers/DSAVE-R: DSAVE: Tools to Investigate Variation and Purity of Subpopulations in Single-Cell RNA-Seq Data

Description

Plots the total variation as a function of pool size, with bulk variation as reference.

Usage

DSAVEPlotTotalVariation(dsData, dsNames, bulkIndex = 1)

Arguments

dsData	Output from DSAVEGetTotalVariation or a list of such outputs
dsNames	The names of the dataset(s), either a string or a list of strings
[optional]	bulkIndex A number 1-5, representing the following pseudo-TPM values: 1: 0.5-100k, 2: 0.5-2, 3: 100-100k, 4: 0.5-50, 5: 2-100. Defaults to 1.

Value

the ggplot object

Author(s)

Johan Gustafsson, <[e-mail]>

Examples

## Not run: DSAVEPlotTotalVariation(dsData, dsNames)

SysBioChalmers/DSAVE-R documentation built on Oct. 19, 2021, 11:37 p.m.