API for TedCCLeung/PhotoperiodMotif
What the Package Does (One Line, Title Case)
| Global functions | |
|---|---|
| %>% | Man page |
| CISBP_families | Man page |
| CISBP_motifset | Man page |
| JASPAR_motifset | Man page |
| TAIR10_Grange | Man page |
| addLeadingZeros | Man page Source code |
| cluster_table_to_list | Man page Source code |
| concatenate_FASTA | Man page Source code |
| concatenate_gff3 | Man page Source code |
| denovo_motifset1 | Man page |
| df_TFfamily_colors | Man page |
| enrich_motifs_fisher | Man page Source code |
| enrich_motifs_fisher_subfunc | Source code |
| enrich_result_summary | Man page Source code |
| filter_genes_by_rDEI | Man page Source code |
| genes_to_promoter_Biostring | Man page Source code |
| get_file_names | Source code |
| get_fiveUTR | Source code |
| get_mode | Source code |
| get_motif_names_from_RF | Source code |
| get_prom_five | Source code |
| get_promoters | Man page Source code |
| hclust_motifs | Man page Source code |
| heatmap_FC | Source code |
| heatmap_FDR | Source code |
| heatmap_PVAL | Source code |
| heatmap_TF_family | Man page Source code |
| heatmap_from_Fisher | Man page Source code |
| heatmap_motif_clustering | Man page Source code |
| heatmap_motif_source | Source code |
| heatmap_motif_to_CISBP_family | Man page Source code |
| homer_master | Source code |
| input_homer | Source code |
| input_motifs | Source code |
| make_TAIR10_TxDb | Man page Source code |
| motif_clean_up | Man page Source code |
| motif_to_CISBP_family | Man page Source code |
| motif_to_similar_CISBP | Man page Source code |
| photoperiodic_clusters | Man page |
| pivotDFinDir | Man page Source code |
| pivotFisherData | Source code |
| plot_positional_bias | Man page Source code |
| positional_bias | Man page Source code |
| positional_bias_subfunc | Man page Source code |
| process_homer_matrix | Source code |
| rDEI_summary | Man page |
| read_Fisher_result | Man page Source code |
| read_genes | Man page Source code |
| read_homer_output | Source code |
| run_enrich | Man page Source code |
| run_heatmap | Man page Source code |
| run_input | Man page Source code |
| run_mapping | Man page Source code |
| run_master | Man page Source code |
| theme_Prism | Man page |
