API for TedCCLeung/PhotoperiodMotif
What the Package Does (One Line, Title Case)

Global functions
%>% Man page
CISBP_families Man page
CISBP_motifset Man page
JASPAR_motifset Man page
TAIR10_Grange Man page
addLeadingZeros Man page Source code
cluster_table_to_list Man page Source code
concatenate_FASTA Man page Source code
concatenate_gff3 Man page Source code
denovo_motifset1 Man page
df_TFfamily_colors Man page
enrich_motifs_fisher Man page Source code
enrich_motifs_fisher_subfunc Source code
enrich_result_summary Man page Source code
filter_genes_by_rDEI Man page Source code
genes_to_promoter_Biostring Man page Source code
get_file_names Source code
get_fiveUTR Source code
get_mode Source code
get_motif_names_from_RF Source code
get_prom_five Source code
get_promoters Man page Source code
hclust_motifs Man page Source code
heatmap_FC Source code
heatmap_FDR Source code
heatmap_PVAL Source code
heatmap_TF_family Man page Source code
heatmap_from_Fisher Man page Source code
heatmap_motif_clustering Man page Source code
heatmap_motif_source Source code
heatmap_motif_to_CISBP_family Man page Source code
homer_master Source code
input_homer Source code
input_motifs Source code
make_TAIR10_TxDb Man page Source code
motif_clean_up Man page Source code
motif_to_CISBP_family Man page Source code
motif_to_similar_CISBP Man page Source code
photoperiodic_clusters Man page
pivotDFinDir Man page Source code
pivotFisherData Source code
plot_positional_bias Man page Source code
positional_bias Man page Source code
positional_bias_subfunc Man page Source code
process_homer_matrix Source code
rDEI_summary Man page
read_Fisher_result Man page Source code
read_genes Man page Source code
read_homer_output Source code
run_enrich Man page Source code
run_heatmap Man page Source code
run_input Man page Source code
run_mapping Man page Source code
run_master Man page Source code
theme_Prism Man page
TedCCLeung/PhotoperiodMotif documentation built on April 27, 2022, 9:01 p.m.