rDEI_summary: TAIR10 gene models from Arabidopsis_thaliana.TAIR10.47.gtf

In TedCCLeung/PhotoperiodMotif: What the Package Does (One Line, Title Case)

TAIR10 gene models from Arabidopsis_thaliana.TAIR10.47.gtf

Description

TAIR10 gene models from Arabidopsis_thaliana.TAIR10.47.gtf

Usage

rDEI_summary

Format

A data frame with 53940 rows and 10 variables:

EQ_DEI

daily expression integral at equinox photoperiod

LD_DEI

daily expression integral at long day photoperiod

SD_DEI

daily expression integral at short day photoperiod

EQ_SEM

SEM of daily expression integral at equinox photoperiod

LD_SEM

SEM of daily expression integral at long day photoperiod

SD_SEM

SEM of daily expression integral at short day photoperiod

cond_1

cond_2

cond_3

contrast_cond1_cond2

contrast_cond1_cond3

contrast_cond2_cond3

geneID

log2_rDEI_LDEQ

log2_rDEI_SDEQ

log2_rDEI_SDLD

order

p_LDEQ

p_SDEQ

p_SDLD

rDEI_LDEQ

rDEI_SDEQ

rDEI_SDLD

TedCCLeung/PhotoperiodMotif documentation built on April 27, 2022, 9:01 p.m.