run_mapping | R Documentation |
Function to perform motif mapping
run_mapping(dir, FASTA_files, motif_MEME_file, mapping_pval_threshold = 1e-04)
dir |
Character. Output directory. |
FASTA_files |
Character vector of full paths to FASTA .fa files. |
motif_MEME_file |
Character. Full path to a motif .meme file. |
mapping_pval_threshold |
Numerical. Default 1e-4. Threshold to determine whether a motif has been mapped to a stretch of sequence. |
None.
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