plot_vdj_circos_seurat: Circos plot of V and J segments from Seurat object

plot_vdj_circos_seuratR Documentation

Circos plot of V and J segments from Seurat object

Description

Circos plot of V and J segments from Seurat object

Usage

plot_vdj_circos_seurat(
  object,
  Vsegment,
  Jsegment,
  Dsegment = NULL,
  clone,
  cells = c(),
  ...
)

Arguments

object

Seurat object

Vsegment

Vector of V segment assignment

Jsegment

Vector of J segment assignment

Dsegment

Vector of D segment assignment (not currently implemented)

clone

Vector of clone assignment

cells

Which cells should be included


Terkild/scvdj documentation built on Oct. 22, 2023, 11:12 p.m.