Man pages for USCbiostats/LUCid
Latent Unknown Clustering with Integrated Data
| boot_lucid | Bootstrap method to estimate variability of latent clusters |
| CoG | Covariate Set in the G->X path |
| CoY | Covariate Set in the X->Y path |
| def_initial | Define initial values of parameters for clustering |
| def_tol | Define maximum number of iteration and convergence |
| def_tune | Define tuning parameters for regularization during... |
| est_lucid | Estimating latent clusters with multi-omics data |
| G1 | Genetic Features Set 1 |
| G2 | Genetic Features Set 2 |
| plot_lucid | Plot Sankey diagram for integrative clustering |
| pred_lucid | Model Predictions for LUCID |
| sem_lucid | SEM for latent cluster estimation |
| summary_lucid | Summarize results for integrative clustering |
| tune_lucid | Parallel Grid Search for Tuning Parameters in Latent Cluster... |
| Y1 | Outcome Set 1 |
| Y2 | Outcome Set 2 |
| Z1 | Biomarker Set 1 |
| Z1_Incomp | Incomplete Biomarker Set 1 |
| Z2 | Biomarker Set 2 |
