Description Usage Arguments Value Author(s) References Examples
pred_lucid
produces predicted values for latent clusters and outcome with an IntClust
object and new data.
1 |
Fit |
An |
G |
Genetic effects, a matrix |
CoG |
Covariates to be included in the G->X path |
Z |
Biomarker data, a matrix |
Y |
Disease outcome, a vector; default is NULL |
CoY |
Covariates to be included in the X->Y path |
pred_lucid
returns a list containing predicted values.
pred_cluster |
predicted probabilities for latent clusters with/without the outcome |
pred_outcome |
predicted values for outcome |
Cheng Peng, Zhao Yang, David V. Conti
Cheng Peng, Jun Wang, Isaac Asante, Stan Louie, Ran Jin, Lida Chatzi, Graham Casey, Duncan C Thomas, David V Conti, A Latent Unknown Clustering Integrating Multi-Omics Data (LUCID) with Phenotypic Traits, Bioinformatics, , btz667, https://doi.org/10.1093/bioinformatics/btz667.
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