Files in USCbiostats/hJAM
Hierarchical Joint Analysis of Marginal Summary Statistics
.Rbuildignore
.github/workflows/R-CMD-check.yaml
.gitignore
CRAN-RELEASE
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/EN.hJAM.R
R/JAM_A.R
R/SHAJAM.R
R/data.R
R/hJAM.R
R/hJAM_egger.R
R/helper.R
R/mJAM_Forward.R
R/mJAM_LDpruning.R
R/mJAM_SuSiE.R
R/mJAM_SuSiE_helper.R
R/mJAM_build_CS.R
R/mJAM_get_condp_logp.R
R/mJAM_helper.R
R/mJAM_helper_chrX.R
R/print.R
R/susieJAM.R
README.Rmd
README.md
cran-comments.md
data/ENhJAM.SimulationSet.RData
data/GTEx.PrCa.RData
data/MI.RData
data/PrCa.lipids.RData
doc/hJAM_vignette.R
doc/hJAM_vignette.Rmd
doc/hJAM_vignette.html
hJAM.Rproj
man/EN.hJAM.Rd
man/ENhJAM.SimulationSet.Rd
man/GTEx.PrCa.Rd
man/JAM_A.Rd
man/JAM_alphas.Rd
man/LogisticToLinearEffects.Rd
man/MI.Rd
man/PrCa.lipids.Rd
man/SHAJAM.Rd
man/SNPs_heatmap.Rd
man/SNPs_scatter_plot.Rd
man/get_XtX.Rd
man/get_yty.Rd
man/get_z.Rd
man/hJAM.Rd
man/hJAM_egger.Rd
man/mJAM_Forward.Rd
man/mJAM_LDpruning.Rd
man/mJAM_SuSiE.Rd
man/mJAM_SuSiE_get_cs.Rd
man/mJAM_build_CS.Rd
man/mJAM_get_PrM.Rd
man/mJAM_get_PrM_Wald.Rd
man/mJAM_get_PrMed.Rd
man/mJAM_get_condp.Rd
man/mJAM_get_condp_selected.Rd
man/output.format.Rd
man/print.ENhJAM.Rd
man/print.SHAJAM.Rd
man/print.hJAM.Rd
man/print.hJAM_egger.Rd
man/susieJAM_A.Rd
man/susieJAM_alphas.Rd
man/susie_get_posterior_mean_v2.Rd
man/susie_get_posterior_sd_v2.Rd
manuscript_codes/applied_examples/COJO.R
manuscript_codes/applied_examples/ME_v4.1.R
manuscript_codes/applied_examples/msCAVIAR.R
manuscript_codes/simulation/Sim_missing.R
manuscript_codes/simulation/Sim_nomissing.R
vignettes/.gitignore
vignettes/hJAM_vignette.Rmd
