Description Usage Arguments Value
View source: R/opti_thermal_habitat.R
Calculate optical thermal habitat using temp and light thresholds
1 2 3 4 5 6 7 8 9 10 11 12 13 | opti_thermal_habitat(
opt_wtr,
io,
kd,
lat,
lon,
hypso,
irr_thresh = c(0, 2000),
wtr_thresh = c(0, 25),
area_type = "benthic",
interp_hour = FALSE,
approx_method = "linear"
)
|
kd |
Light attenuation value of the lake (in m^-1 units) |
hypso |
Hypsography data.frame, with columns |
irr_thresh |
Vector of length 2 with min and max value (in that order) for light thresholds. Note: >= and <= is used for comparison, so thresholds must be adjusted accordingly. |
wtr_thresh |
Vector of length 2 with min and max value (in that order) for temperature thresholds. Note: >= and <= is used for comparison, so thresholds must be adjusted accordingly. |
area_type |
How benthic area is to be calculated. Defaults to |
interp_hour |
Interpolate to hourly data |
approx_method |
Method for the approximate function |
data.frame with three columns. opti_hab, therm_hab, opti_therm_hab for areas of each habitat type (with opti_therm_hab being the overlap of both). Units are in m^2*days. Divide by the number of days in the data to
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