Junction_Sequence_from_Genome: Grab_BS_Junc_Sequence
In VCCRI/Ularcirc: Shiny app for canonical and back splicing analysis (i.e. circular and mRNA analysis)
View source: R/Ularcirc_standalone.R
Junction_Sequence_from_Genome R Documentation
Grab_BS_Junc_Sequence
Description
This function extracts genomic sequence that is likely to capture BSJ. Function does not cross
validate to gene models.
Usage
Junction_Sequence_from_Genome(SelectUniqueJunct_Value, GeneList)
Arguments
GeneList
: GeneList
SelectUniqueJunct_value
: a dataframe with columns names startDonor, strandDonor, startAcceptor
VCCRI/Ularcirc documentation built on April 8, 2022, 5:17 p.m.
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View source: R/Ularcirc_standalone.R
| Junction_Sequence_from_Genome | R Documentation |
Grab_BS_Junc_Sequence
Description
This function extracts genomic sequence that is likely to capture BSJ. Function does not cross validate to gene models.
Usage
Junction_Sequence_from_Genome(SelectUniqueJunct_Value, GeneList)
Arguments
GeneList |
: GeneList |
SelectUniqueJunct_value |
: a dataframe with columns names startDonor, strandDonor, startAcceptor |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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