inst/tinytest/test_clean_Metamorpheus.R
In Vitek-Lab/MSstatsConvert: Import Data from Various Mass Spectrometry Signal Processing Tools to MSstats Format
# Test Metamorpheus .cleanRawMetamorpheus ---------------------------
file_path = system.file("tinytest/processed_data/Metamorpheus/MSstatsMetamorpheusFilesObject.rds", package="MSstatsConvert")
input = readRDS(file_path)
output = MSstatsConvert:::.cleanRawMetamorpheus(input)
expect_equal(ncol(output), 5)
expect_true(nrow(output) > 0)
expect_true("Run" %in% colnames(output))
expect_true("ProteinName" %in% colnames(output))
expect_true("PeptideSequence" %in% colnames(output))
expect_true("PrecursorCharge" %in% colnames(output))
expect_true("Intensity" %in% colnames(output))
Vitek-Lab/MSstatsConvert documentation built on May 9, 2024, 6:23 a.m.
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# Test Metamorpheus .cleanRawMetamorpheus ---------------------------
file_path = system.file("tinytest/processed_data/Metamorpheus/MSstatsMetamorpheusFilesObject.rds", package="MSstatsConvert")
input = readRDS(file_path)
output = MSstatsConvert:::.cleanRawMetamorpheus(input)
expect_equal(ncol(output), 5)
expect_true(nrow(output) > 0)
expect_true("Run" %in% colnames(output))
expect_true("ProteinName" %in% colnames(output))
expect_true("PeptideSequence" %in% colnames(output))
expect_true("PrecursorCharge" %in% colnames(output))
expect_true("Intensity" %in% colnames(output))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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