| .MSstatsFormat |
Man page
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| .addFractions |
Man page
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| .adjustIntensities |
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| .aggregatePSMstoPeptideIons |
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| .checkAnnotation |
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| .checkDDA |
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| .checkDuplicatedMeasurements |
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| .checkMSstatsParams |
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| .checkMultiRun |
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| .checkOverlappedFeatures |
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| .cleanByFeature |
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| .cleanRawDIANN |
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| .cleanRawDIAUmpire |
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| .cleanRawMaxQuant |
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| .cleanRawMetamorpheus |
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| .cleanRawOpenMS |
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| .cleanRawOpenSWATH |
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| .cleanRawPD |
Man page
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| .cleanRawPDMSstats |
Man page
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| .cleanRawPDTMT |
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| .cleanRawPhilosopher |
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| .cleanRawProgenesis |
Man page
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| .cleanRawSkyline |
Man page
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| .cleanRawSpectroMineTMT |
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| .cleanRawSpectronaut |
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| .combine |
Source code
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| .countCommonFeatures |
Man page
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| .fillValues |
Man page
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| .filterByPattern |
Man page
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| .filterByScore |
Man page
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| .filterExact |
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| .filterFewMeasurements |
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| .filterManyColumns |
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| .filterOverlapped |
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| .findAvailable |
Man page
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| .fixBasicColumns |
Man page
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| .fixColumnTypes |
Man page
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| .fixMissingValues |
Man page
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| .getChannelColumns |
Man page
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| .getCorrectFraction |
Man page
Source code
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| .getDataTable |
Man page
Source code
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| .getFullDesign |
Man page
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| .getMissingRunsPerFeature |
Man page
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| .getOverlappingFeatures |
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| .handleFiltering |
Man page
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| .handleFractions |
Man page
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| .handleFractionsLF |
Man page
Source code
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| .handleFractionsTMT |
Man page
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| .handleIsotopicPeaks |
Man page
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| .handleSharedPeptides |
Man page
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| .handleSingleFeaturePerProtein |
Man page
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| .logConverterOptions |
Man page
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| .logSuccess |
Man page
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| .makeBalancedDesign |
Man page
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| .makeExactFilterMessage |
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| .makeScoreFilterMessage |
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| .mergeAnnotation |
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| .nullAppender |
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| .onLoad |
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| .removeOverlappingFeatures |
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| .removeSharedPeptides |
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| .selectMSstatsColumns |
Man page
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| .sharedParametersAmongConverters |
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| .standardizeColnames |
Man page
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| .summarizeMultipleMeasurements |
Man page
Source code
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| .summarizeMultiplePSMs |
Man page
Source code
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| .validatePDTMTInputColumns |
Man page
Source code
|
| DIANNtoMSstatsFormat |
Man page
Source code
|
| DIAUmpiretoMSstatsFormat |
Man page
Source code
|
| FragPipetoMSstatsFormat |
Man page
Source code
|
| MSstatsBalancedDesign |
Man page
Source code
|
| MSstatsClean |
Man page
|
| MSstatsClean,MSstatsDIANNFiles-method |
Man page
|
| MSstatsClean,MSstatsDIAUmpireFiles-method |
Man page
|
| MSstatsClean,MSstatsMaxQuantFiles-method |
Man page
|
| MSstatsClean,MSstatsMetamorpheusFiles-method |
Man page
|
| MSstatsClean,MSstatsOpenMSFiles-method |
Man page
|
| MSstatsClean,MSstatsOpenSWATHFiles-method |
Man page
|
| MSstatsClean,MSstatsPhilosopherFiles-method |
Man page
|
| MSstatsClean,MSstatsProgenesisFiles-method |
Man page
|
| MSstatsClean,MSstatsProteomeDiscovererFiles-method |
Man page
|
| MSstatsClean,MSstatsSkylineFiles-method |
Man page
|
| MSstatsClean,MSstatsSpectroMineFiles-method |
Man page
|
| MSstatsClean,MSstatsSpectronautFiles-method |
Man page
|
| MSstatsConvert |
Man page
|
| MSstatsConvert-package |
Man page
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| MSstatsDIANNFiles-class |
Man page
|
| MSstatsDIAUmpireFiles-class |
Man page
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| MSstatsFragPipeFiles-class |
Man page
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| MSstatsImport |
Man page
Source code
|
| MSstatsInputFiles-class |
Man page
|
| MSstatsLogsSettings |
Man page
Source code
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| MSstatsMakeAnnotation |
Man page
Source code
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| MSstatsMaxQuantFiles-class |
Man page
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| MSstatsMetamorpheusFiles-class |
Man page
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| MSstatsOpenMSFiles-class |
Man page
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| MSstatsOpenSWATHFiles-class |
Man page
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| MSstatsPhilosopherFiles-class |
Man page
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| MSstatsPreprocess |
Man page
Source code
|
| MSstatsProgenesisFiles-class |
Man page
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| MSstatsProteomeDiscovererFiles-class |
Man page
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| MSstatsSaveSessionInfo |
Man page
Source code
|
| MSstatsSkylineFiles-class |
Man page
|
| MSstatsSpectroMineFiles-class |
Man page
|
| MSstatsSpectronautFiles-class |
Man page
|
| MaxQtoMSstatsFormat |
Man page
Source code
|
| MetamorpheusToMSstatsFormat |
Man page
Source code
|
| OpenMStoMSstatsFormat |
Man page
Source code
|
| OpenSWATHtoMSstatsFormat |
Man page
Source code
|
| PDtoMSstatsFormat |
Man page
Source code
|
| ProgenesistoMSstatsFormat |
Man page
Source code
|
| SkylinetoMSstatsFormat |
Man page
Source code
|
| SpectronauttoMSstatsFormat |
Man page
Source code
|
| as.data.frame.MSstatsValidated |
Man page
Source code
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| as.data.table.MSstatsValidated |
Man page
Source code
|
| getDataType |
Man page
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| getDataType,MSstatsInputFiles-method |
Man page
|
| getInputFile |
Man page
|
| getInputFile,MSstatsInputFiles-method |
Man page
|
| getInputFile,MSstatsPhilosopherFiles-method |
Man page
|
