annotation_enrichment_analysis | Perform enrichment analysis |
create_summary_table_PPI | Retrieve protein-protein interaction information from... |
filter_annotation_results | Plot the result of the annotation enrichment analysis |
get_annotations_enrichr | Get annotations using enrichR |
get_annotations_KEGG | Create a data.frame with KEGG pathways corrresponding to a... |
get_annotations_uniprot | Create a data.frame with UniProt annotations corrresponding... |
get_PPI_from_BioGRID | Retrieve protein-protein interaction information from BioGRID |
get_PPI_from_HPRD | Retrieve protein-protein interaction information from HPRD |
identify_reviewed_proteins_ids | Identify which protein IDs correspond to SwissProt reviewed... |
parse_ids | Parse protein ids. This is useful to remove additionnal... |
plot_annotation_results | Plot the result of the annotation enrichment analysis |
retrieve_all_KEGG_pathways | Create a data.frame with all KEGG pathways for a given... |
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