identify_reviewed_proteins_ids | R Documentation |
Identify which protein IDs correspond to SwissProt reviewed entries
identify_reviewed_proteins_ids(ids, sep = ";", organism = NULL)
ids |
vector of protein ids |
sep |
character separating different protein ids |
organism |
taxon id (10090 for Mus musculus, 9606 for human). If null, the most represented organism for ten first protein ids is chosen. |
a data.frame with columns 'id' and 'reviewed'
res <- queryup::query_uniprot(query=list("gene_exact"="Pik3r1", "organism_id"="10090"))
identify_reviewed_proteins_ids(res$Entry)
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