CCfoldHS.smoother: CCfoldHS.smoother
In WHG1990/CCTools: A suite of tools for analysing CC-seq data.
CCfoldHS.smoother R Documentation
CCfoldHS.smoother
Description
Smooths a log2(x/y) values from a hotspot column using loess
Usage
CCfoldHS.smoother(input, sc = 80, si = 100, txtout = F)
Arguments
input
filename for a hotspot log2(x/y) table
sc
smoothing constant
si
smooth interval default 100
Examples
packages.check("doParallel")
cl <- makeCluster(8)
registerDoParallel(cl)
foreach (i = 1:length(files),.packages=c("nealeLabFunctions")) %dopar% {
CCfoldHS.smoother(files[i])
}stopCluster(cl)
WHG1990/CCTools documentation built on June 16, 2024, 1:36 a.m.
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| CCfoldHS.smoother | R Documentation |
CCfoldHS.smoother
Description
Smooths a log2(x/y) values from a hotspot column using loess
Usage
CCfoldHS.smoother(input, sc = 80, si = 100, txtout = F)
Arguments
input |
filename for a hotspot log2(x/y) table |
sc |
smoothing constant |
si |
smooth interval default 100 |
Examples
packages.check("doParallel")
cl <- makeCluster(8)
registerDoParallel(cl)
foreach (i = 1:length(files),.packages=c("nealeLabFunctions")) %dopar% {
CCfoldHS.smoother(files[i])
}stopCluster(cl)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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