featureplotter: featureplotter

In WHG1990/CCTools: A suite of tools for analysing CC-seq data.

featureplotter

Description

Wrapper for Matt's gene track plotter in the original mapper.

Usage

featureplotter(
  x,
  coln = "genename",
  col = "wheat",
  lty = 1,
  strand = "+",
  av = 50,
  lab = T,
  tv = av,
  pos1 = xl1,
  pos2 = xl2,
  cex.size = 0.9
)

Arguments

x	Featurelist subsetted from the AllElementsDUB
col	The fill colour for the feature arrows.
lty	Line type for border. 1 for solid, 2 for dotted.
strand	Which strand are the features on? can be "+", "-" or "*"
av	Vertical location at which to plot feature.
tv	Vertical location at which to plot text. Default is same as av (plots within feature).

Author(s)

Matt Neale and Will Gittens

WHG1990/CCTools documentation built on June 16, 2024, 1:36 a.m.